Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

/opt/conda/bin/conda init bash

Note: If for some reason you want to switch back to your personal conda setup and loose the use of environment switching using Jupyter Notebooks/Lab on the HPC simply run:

/home/<username>/*conda/bin/conda init bash

You will need to re-run /opt/conda/bin/conda init bash to enable environment switching again.


This modifies how you will be able to call your own existing envs from command line.

...

You can do this with the following commands within the environment you want to use:

To install the python kernel run: conda install -c anaconda ipykernel

To install the R kernel run: conda install -c r r-irkernel


You can change the active environment once inside the notebook (or when creating one) via kernels: Kernel > Change kernel > whatever_you_name_your_env