get everyone on the team into Confluence and into this Space
Set goals
Plan next steps toward achieving goals
Discussion items
Time
Item
Who
Notes
5min
infrastructure:
hardware
software
Name
import from <places> into Posda then into NBIA
There is a hangup between SECTRA to Posda-to-ARIES
Cancerimagingarchive.net has a landing page (Wordpress, Confluence, NBIA-for-search-and-download)
Mongodb to manage nonDICOM data? What processes <are, should be> built?
Collection 1: Gait and PD
Tuhin
Linkage between ARIES ID and Virmani lab ID is established via secure server site
Some of the data were not in SECTRA and don't have MRN (stored by name) but there exists a mapping table to ARIESID for all (we think)
This lab has loaded data to ~200 ID to SECTRA since ~2-3 years ago but older scans are on CD / hard drive in the lab
Start loading "things" to ARIES using the SECTRA PACS to pull to Posda & curate there.
Collection 2: Dataset(s) from NDL
Aaron
Passthrough ARIES IDs? Or consistent process through Sohrab's tool for this lab's project IDs? He can set this up for NDL (does not have linkages required for AR-CDR or SECTRA
Discussion with Aaron and Bill to set up sharedrive to pull data into Posda
DICOM
NIfTI (not yet) (BIDS format with JSON sidecar) "Processed Data"
Spreadsheets associated have been deidentified; do NOT yet have ARIES ID in the spreadsheets - interval offsets can be applied programmatically but may not yet have been
Collection 3: Dataset(s) from IoA
Aaron
Sohrab needs to know who from their team needs access to the utility that will create IDs for their study
Aaron can pass a bag of disks of images for import to Posda
Collection 4: Dataset(s) from MMdb
Phil
On the Horizon
Fred
Action items
Stand up a wiki
meeting notes
collections status
infrastructure status (infrastructure notes page that is team-restricted)
Plan next step toward Neurocog data transfer
Plan next steps toward DICOM data transfer
Posda instance upgrade
NBIA instance upgrade
SECTRA PACS send of TT3 (nonTCIA) data
Next step for Gait lab data transfer
Aaron reports Gohar will input their subject ID / MRN and Sohrab can work with those; then we can use the ARIES ID to link to (b) SECTRA and (c) AR-CDR
Sohrab & Mahanaz are writng a paper about mapping identities for J Biomed Inform with Fred; this describes both “giving you a new ID” and “taking your research ID” into the database.
Phil and Michael have a functioning query-retrieve from the SECTRA PACS. This has fed 10 data to TCIA-Posda, Bill reports he and Terri are doing well managing this process. They are preparing to set up pipelines to feed to ARIES-Posda as well.