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Date

12 (every other week)

Attendees

  • T Nolan (present)

  • Aaron (present)
  • Jonathan (present)
  • Tuhin (present)
  • Lakshmi
  • Linda (present)
  • Kirk (present)
  • Fred 
  • Phil
  • Bill (present)
  • Quasar
  • Jeff
  • Terri
  • Sohrab (present)

Goals

  • Stand up a wiki
    • get everyone on the team into Confluence and into this Space
  • Set goals
  • Plan next steps toward achieving goals

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TimeItemWhoNotes

infrastructure: 

hardware

software


  • import from <places> into Posda then into NBIA
  • There is a hangup between SECTRA to Posda-to-ARIES
  • Cancerimagingarchive.net has a landing page (Wordpress, Confluence, NBIA-for-search-and-download)


Mongodb to manage nonDICOM data? What processes <are, should be> built?



Collection 1: Gait and PDTuhin
  1. Linkage between ARIES ID and Virmani lab ID is established via secure server site
  2. Some of the data were not in SECTRA and don't have MRN (stored by name) but there exists a mapping table to ARIESID for all (we think)
  3. This lab has loaded data to ~200 ID to SECTRA since ~2-3 years ago but older scans are on CD / hard drive in the lab
  4. Start loading "things" to ARIES using the SECTRA PACS to pull to Posda & curate there.

Collection 2: Dataset(s) from NDLAaron
  1. Passthrough ARIES IDs? Or consistent process through Sohrab's tool for this lab's project IDs? He can set this up for NDL (does not have linkages required for AR-CDR or SECTRA
  2. Discussion with Aaron and Bill to set up sharedrive to pull data into Posda
    1. DICOM
    2. NIfTI (not yet) (BIDS format with JSON sidecar) "Processed Data"
    3. Spreadsheets associated have been deidentified; do NOT yet have ARIES ID in the spreadsheets - interval offsets can be applied programmatically but may not yet have been

Collection 3: Dataset(s) from IoAAaron
  1. Sohrab needs to know who from their team needs access to the utility that will create IDs for their study
  2. Aaron can pass a bag of disks of images for import to Posda

Collection 4: Dataset(s) from MMdbPhil

On the HorizonFred

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